Avocado

This is a brief guide to growing avocado trees in Hawaii

Mango Cultivars in Hawaii

Mango cultivars grown in Hawaii are discussed

Cover Crops for Orchards in Hawaii

The most appropriate cover crop species and practices differ depending on the orchard site, type of tree crop, and stage of orchard development. Success with cover crops depends on proper selection of plant species and on skill in establishing and managing them. Experience with cover crops in fruit tree plantings in Hawaii is limited. This publication presents information on the use and management of some legume and grass species as cover crops in avocado, banana, macadamia, and coffee orchards in Hawaii. Suggested species or practices should be tested in trial sections of orchards before widespread application

Persimmon

Short publication covering culture, management, and harvest of persimmon in Hawaii

Self-interference fluorescence microscopy: three dimensional fluorescence imaging without depth scanning

We present a new method for high-resolution, three-dimensional fluorescence imaging. In contrast to beam-scanning confocal microscopy, where the laser focus must be scanned both laterally and axially to collect a volume, we obtain depth information without the necessity of depth scanning. In this method, the emitted fluorescence is collected in the backward direction and is sent through a phase plate that encodes the depth information into the phase of a spectrally resolved interference pattern. We demonstrate that decoding this phase information allows for depth localization accuracy better than 4 μm over a 500 μm depth-of-field. In a high numerical aperture configuration with a much smaller depth of field, a localization accuracy of tens of nanometers can be achieved. This approach is ideally suited for miniature endoscopes, where space limitations at the endoscope tip render depth scanning difficult. We illustrate the potential for 3D visualization of complex biological samples by constructing a threedimensional volume of the microvasculature of ex vivo murine heart tissue from a single 2D scan. © 2012 Optical Society of America

Strategies towards robust interpretations of in situ zircon Lu–Hf isotope analyses

The combination of U–Pb and Lu–Hf compositions measured in zircon crystals is a remarkably powerful isotopic couplet that provides measures on both the timing of mineral growth and the radiogenic enrichment of the source from which the zircon grew. The U–Pb age documents the timing of zircon crystallization/recrystallization and Hf isotopes inform on the degree to which the host melt was derived from a radiogenic reservoir (e.g. depleted mantle) versus an unradiogenic reservoir (e.g. ancient continental crust), or some mixture of these sources. The ease of generating large quantities of zircon U–Pb and Lu–Hf data has been in large part facilitated by instrument advances. However, the dramatic increase in time constrained zircon Lu–Hf analyses in the Earth science community has brought to the fore the importance of careful data collection and reduction workflows, onto which robust geological interpretations may be based. In this work, we discuss the fundamentals of Lu–Hf isotopes in zircon, which then allows us to provide a robust, accessible, methodology for the assessment of data quality. Additionally, we discuss some novel techniques for: data visualization — that facilitates better transparency of data interpretation; integration of geographic information — that may reveal spatial trends where temporal trends were only apparent before; and some novel statistical evaluation tools — that may provide more rigorous inter- and intra-sample comparisons

Oestrogen receptor positive breast cancer metastasis to bone: inhibition by targeting the bone microenvironment in vivo

Clinical trials have shown that adjuvant Zoledronic acid (ZOL) reduces the development of bone metastases irrespective of ER status. However, post-menopausal patients show anti-tumour benefit with ZOL whereas pre-menopausal patients do not. Here we have developed in vivo models of spontaneous ER+ve breast cancer metastasis to bone and investigated the effects of ZOL and oestrogen on tumour cell dissemination and growth. ER+ve (MCF7, T47D) or ER−ve (MDA-MB-231) cells were administered by inter-mammary or inter-cardiac injection into female nude mice ± estradiol. Mice were administered saline or 100 μg/kg ZOL weekly. Tumour growth, dissemination of tumour cells in blood, bone and bone turnover were monitored by luciferase imaging, histology, flow cytometry, two-photon microscopy, micro-CT and TRAP/P1NP ELISA. Estradiol induced metastasis of ER+ve cells to bone in 80–100 % of animals whereas bone metastases from ER−ve cells were unaffected. Administration of ZOL had no effect on tumour growth in the fat pad but significantly inhibited dissemination of ER+ve tumour cells to bone and frequency of bone metastasis. Estradiol and ZOL increased bone volume via different mechanisms: Estradiol increased activity of bone forming osteoblasts whereas administration of ZOL to estradiol supplemented mice decreased osteoclast activity and returned osteoblast activity to levels comparable to that of saline treated mice. ER−ve cells require increased osteoclast activity to grow in bone whereas ER+ve cells do not. Zol does not affect ER+ve tumour growth in soft tissue, however, inhibition of bone turnover by ZOL reduced dissemination and growth of ER+ve breast cancer cells in bone

Illuminating the bacterial microbiome of Australian ticks with 16S and Rickettsia-specific next-generation sequencing

Next-generation sequencing (NGS) studies show that mosquito and tick microbiomes influence the transmission of pathogens, opening new avenues for vector-borne pathogen control. Recent microbiological studies of Australian ticks highlight fundamental knowledge gaps of tick-borne agents. This investigation explored the composition, diversity and prevalence of bacteria in Australian ticks (n = 655) from companion animals (dogs, cats and horses). Bacterial 16S NGS was used to identify most bacterial taxa and a Rickettsia-specific NGS assay was developed to identify Rickettsia species that were indistinguishable at the V1-2 regions of 16S. Sanger sequencing of near full-length 16S was used to confirm whether species detected by 16S NGS were novel. The haemotropic bacterial pathogens Anaplasma platys, Bartonella clarridgeiae, “Candidatus Mycoplasma haematoparvum” and Coxiella burnetii were identified in Rhipicephalus sanguineus (s.l.) from Queensland (QLD), Western Australia, the Northern Territory (NT), and South Australia, Ixodes holocyclus from QLD, Rh. sanguineus (s.l.) from the NT, and I. holocyclus from QLD, respectively. Analysis of the control data showed that cross-talk compromises the detection of rare species as filtering thresholds for less abundant sequences had to be applied to mitigate false positives. A comparison of the taxonomic assignments made with 16S sequence databases revealed inconsistencies. The Rickettsia-specific citrate synthase gene NGS assay enabled the identification of Rickettsia co-infections with potentially novel species and genotypes most similar (97.9–99.1%) to Rickettsia raoultii and Rickettsia gravesii. “Candidatus Rickettsia jingxinensis” was identified for the first time in Australia. Phylogenetic analysis of near full-length 16S sequences confirmed a novel Coxiellaceae genus and species, two novel Francisella species, and two novel Francisella genotypes. Cross-talk raises concerns for the MiSeq platform as a diagnostic tool for clinical samples. This study provides recommendations for adjustments to Illuminaʼs 16S metagenomic sequencing protocol that help track and reduce cross-talk from cross-contamination during library preparation. The inconsistencies in taxonomic assignment emphasise the need for curated and quality-checked sequence databases

Dynamical modelling of the elliptical galaxy NGC 2974

In this paper we analyse the relations between a previously described oblate Jaffe model for an ellipsoidal galaxy and the observed quantities for NGC 2974, and obtain the length and velocity scales for a relevant elliptical galaxy model. We then derive the finite total mass of the model from these scales, and finally find a good fit of an isotropic oblate Jaffe model by using the Gauss-Hermite fit parameters and the observed ellipticity of the galaxy NGC 2974. The model is also used to predict the total luminous mass of NGC 2974, assuming that the influence of dark matter in this galaxy on the image, ellipticity and Gauss-Hermite fit parameters of this galaxy is negligible within the central region, of radius $0.5R_{\rm e}.$Comment: 7 figure